Full Changelog¶
0.9.2 (2024-12-02)¶
Compatibility with Astropy 7 (https://github.com/astropy/halotools/pull/1107)
0.9.1 (2024-09-11)¶
Repackage halotools according to pyproject.toml (https://github.com/astropy/halotools/pull/1093)
0.9.0 (2024-09-06)¶
Add models and mock observations of intrinsic alignments (https://github.com/astropy/halotools/pull/1056)
0.8.2 (2023-06-30)¶
Add non-Poissonian occupation statistics for satellites (https://github.com/astropy/halotools/pull/1053)
Fix bug in little h convention in Leauthaud+11 HOD model (https://github.com/astropy/halotools/pull/1063)
Fix bug in PBC handling of return_xyz_formatted_array convenience function (https://github.com/astropy/halotools/pull/1066)
0.8.1 (2022-09-28)¶
Include command-line scripts for halo catalog downloads that were omitted from v0.8 release
0.8 (2022-09-25)¶
Change packaging tools to pyproject.toml
Drop dependency on astropy-helpers
Add new calculator for uber_hostid quantity
Bug fix for cross-correlations with the Hamilton and Landy-Szalay estimators. See https://github.com/astropy/halotools/pull/1032
Bug fix for tpcf jackknife. See https://github.com/astropy/halotools/pull/1020
Bug fix for the central occupation function of the Zu & Mandelbaum 2016 HOD. See https://github.com/astropy/halotools/pull/1028.
Add support for non-Poissonian satellite occupation statistics. See https://github.com/astropy/halotools/pull/996
Add vector rotation utilities to halotools.utils
Add support for Conditional counts in cylinders. See https://github.com/astropy/halotools/pull/987
0.7 (2020-1-29)¶
Added new
matrix_operations_3d
module in theutils
subpackage that contains Numpy functions related to three-dimensional rotations.Added new
inertia_tensor_per_object
function inmock_observables
that calculates the inertia tensor for a set of points and masses in a periodic box.Added new option for the marked correlation functions to accommodate counting pairs of points passing a variable merger ratio criteria
Added
fuzzy_digitize
function toutils
sub-package.Added
sliding_conditional_percentile
function toutils
sub-package.Added new
resample_x_to_match_y
function tohalotools.utils
.Renamed old implementation of
conditional_abunmatch
toconditional_abunmatch_bin_based
Added new bin-free implementation of
conditional_abunmatch
.Added new utils function
bijective_distribution_matching
Added new
load_um_binary_sfr_catalog
function to load SFR catalogs from UniverseMachine into memoryAdded new
return_indexes
feature to conditional_abunmatch function. See https://github.com/astropy/halotools/pull/913.New function
mean_delta_sigma
replaces olddelta_sigma
function. See #955.
0.6 (2017-12-15)¶
Changed the API for mock_observables.pair_counters.npairs_s_mu which now requires
mu_bins
to be in the conventional mu=cos(theta_LOS) format instead of mu=sin(theta_LOS). See https://github.com/astropy/halotools/pull/768Added new
mock_observables
functionsradial_distance
andradial_distance_and_velocity
functions. See https://github.com/astropy/halotools/pull/782Added new
distribution_matching_indices
function. See https://github.com/astropy/halotools/pull/795.Removed
max_sample_size
keyword argument from allmock_observables
functions.Added new
weighted_npairs_s_mu
function tomock_observables
sub-package. See Issue #810Added standalone function to apply redshift-space distortions. See Issue #806.
Added
num_lines_header
optional keyword argument to TabularAsciiReaderAdded
wp_jackknife
function. See https://github.com/astropy/halotools/pull/814.Fixed bug in the normalization of the covariance matrices in the
tpcf_jackknife
function. See https://github.com/astropy/halotools/issues/815.Added
rp_pi_tpcf_jackknife
function - See #822Fixed bug in estimate_ngals method for case of assembly-biased occupation models. See https://github.com/astropy/halotools/issues/801
Removed obsolete bounds_enforcing_decorator_factory function - see https://github.com/astropy/halotools/issues/756
Fixed bug impacting ability of python 3.6 users to access downsampled particle data - See Issues #821, #826, and #831.
Fixed bug in isolation criteria for calculations without PBCs. See Issue #776.
Fixed bug in
weighted_npairs_s_mu
when called in parallel. See https://github.com/astropy/halotools/issues/837.Fixed bug in
radial_profile_3d
when called in parallel. See https://github.com/astropy/halotools/issues/854.Fixed bug in
radial_profile_3d
when called without periodic boundary conditions. See https://github.com/astropy/halotools/issues/862Fixed bug in
velocity_marked_npairs_3d
andvelocity_marked_npairs_xy_z
when called with default arguments. See https://github.com/astropy/halotools/issues/836.Changed the
weight_func_id
numbers associated with weighting functions forvelocity_marked_npairs_3d
andvelocity_marked_npairs_xy_z
where e.g. 11 is now 1, etc.Added new
test_installation
feature that dramatically shortens the length of time users need to spend verifying their installation
0.5 (2017-05-31)¶
Added SubhaloPhaseSpace class for modeling HOD-style satellite velocities with subhalos.
The
Lbox
attribute of all Halotools halo catalogs is now stored as an array of length 3 instead of a scalar.Fixed bug in multi-threaded calculations using npairs_per_object_3d function.
Added
empirical_models.abunmatch
sub-package providing conditional abundance matching functionalityFixed bug in mock population when using the seed keyword, resolving Issue #672, https://github.com/astropy/halotools/issues/672.
Added
mock_observables.hod_from_mock
convenience function to calculate the HOD from a mock galaxy samplePerformance enhancements to marked correlation functions
Fixed bug in
mock_observables.pair_counters.npairs_s_mu
that impactedmock_observables.s_mu_tpcf
Added Zu & Mandelbaum 2015 and Zu & Mandelbaum 2016 HOD models
Modified internals of
mock_observables.delta_sigma
function, including an API change by removing thepi_max
argument. Additionally included newmock_observables.delta_sigma_from_precomputed
function to compute the results from a set of pre-computed pairs. See https://github.com/astropy/halotools/pull/696.Fixed factor of 2 error in tpcf_multipole, resolving https://github.com/astropy/halotools/issues/651
Complete refactoring of the halotools/empirical_models/phase_space_models. No changes to either the API or behavior of any associated classes or functions.
Addition of two new classes
halotools.empirical_models.BiasedNFWPhaseSpace
andhalotools.empirical_models.SFRBiasedNFWPhaseSpace
for NFW satellites with biased concentrations and Jeans solutions.The
gal_types
attribute of HODModelFactory-produced models is now sorted so thatcentrals
always appears beforesatellites
. This new default behavior is more common for interdependent occupation models, where satellite abundance depends upon central galaxy characteristics, rather than the other way around. See https://github.com/astropy/halotools/pull/729Added new keyword arguments to
return_xyz_formatted_array
function enabling application of redshift-space distortions for galaxy samples at higher redshift. Previously, the user needed to do this manually). Default behavior of this function is unchanged, provided users had not locally modified thesim_defaults
module to have setdefault_redshift
greater than zero.
0.4 (2016-08-11)¶
All models now support an optional
seed
keyword argument, allowing for deterministic Monte Carlo realizations of models. As a result of this feature, it is now mandatory that all user-defined models obey a new constraint. Any function appearing in themock_generation_calling_sequence
must now use the kwargs Python syntax to catch any additional inputs passed to these functions by the MockFactory.Added relative_positions_and_velocities function to mock_observables
Fixed little h bug in the Behroozi10SmHm class. This impacts the Leauthaud11Cens and Leauthaud11Sats classes, as well as the
leauthaud11
composite model.Fixed bug in mock_observables.pair_counters.npairs_per_object_3d. See https://github.com/astropy/halotools/issues/606.
New counts_in_cells sub-package in mock_observables
HodMockFactory has new estimate_ngals feature
Fixed buggy behavior for two-point functions called for logical branch
do_auto=True, do_cross=False
Performance enhancement of isolation_functions by 50% - 300%, depending on numerical regime.
Updated all catalogs to version_name=``halotools_v0p4``, resolving the bug pointed out in https://github.com/astropy/halotools/issues/598.
Performance enhancement of npairs_s_mu function by 10-100x after cleaning cython engine of python objects.
0.3 (2016-06-28)¶
Removed distant_observer_redshift function from mock_survey module
Removed -march=native compiler flag to resolve installation problems on some architectures
0.2 (2016-06-09)¶
Halotools is now Python 3.x compatible
Halotools mock_observables package has been given a complete overhaul, adding many new cythonized engines and pair counters (listed below). Functions are 30% - 50x faster, depending on numerical regime. Overhauled engines include velocity_marked_npairs_3d, velocity_marked_npairs_xy_z, npairs_per_object_3d, npairs_s_mu, npairs_jackknife_3d, npairs_projected, npairs_xy_z, npairs_3d, marked_npairs_3d and marked_npairs_xy_z
Added new utils.crossmatch function
Added new mock_observables.radial_profile_3d function
All isolation_functions now return boolean
is_isolated
rather than its inversehas_neighbor
Fixed a bug in mock_observables.delta_sigma. See https://github.com/astropy/halotools/issues/523
Fixed bug in mock_observables.tpcf_jackknife. See https://github.com/astropy/halotools/issues/513
Deleted mock_observables.nearest_neighbor function
0.1 (2016-03-13)¶
Initial release